Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | SAMN04488524_2869 | Not Available | Positive | 3429915 - 3430967 | 39820.7 |
| putative abc transport system permease protein | SAMN04488524_2870 | Not Available | Negative | 3430999 - 3432231 | 44096.4 |
| iron-sulfur cluster assembly protein | SAMN04488524_2871 | Not Available | Negative | 3432332 - 3432685 | 12710.0 |
| hypothetical protein | SAMN04488524_2872 | Not Available | Positive | 3432816 - 3433346 | 20027.3 |
| methylmalonyl-coa mutase | SAMN04488524_2873 | Not Available | Positive | 3433349 - 3434893 | 57069.1 |
| chromosomal replication initiator protein dnaa | SAMN04488524_2874 | Not Available | Positive | 3435088 - 3436518 | 53927.2 |
| nudix domain-containing protein | SAMN04488524_2875 | Not Available | Negative | 3436590 - 3437138 | 20809.8 |
| uncharacterized protein | SAMN04488524_2876 | Not Available | Negative | 3437150 - 3437920 | 26187.5 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | SAMN04488524_2877 | Not Available | Negative | 3437917 - 3438366 | 16424.6 |
| lema protein | SAMN04488524_2878 | Not Available | Negative | 3438449 - 3439030 | 21208.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

