Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine operon attenuation protein / uracil phosphoribosyltransferase | SAMN04488524_2859 | Not Available | Positive | 3420498 - 3421007 | 19250.7 |
| acyltransferase | SAMN04488524_2860 | Not Available | Positive | 3421047 - 3421667 | 24229.3 |
| hypothetical protein | SAMN04488524_2861 | Not Available | Positive | 3421667 - 3422626 | 35781.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04488524_2862 | Not Available | Positive | 3422679 - 3423527 | 32047.1 |
| ferrochelatase | SAMN04488524_2863 | Not Available | Positive | 3423601 - 3424614 | 38206.1 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04488524_2864 | Not Available | Negative | 3424604 - 3425836 | 46141.8 |
| udp-glucose dehydrogenase | SAMN04488524_2865 | Not Available | Positive | 3425984 - 3427297 | 48264.1 |
| dtdp-glucose 4,6-dehydratase | SAMN04488524_2866 | Not Available | Positive | 3427297 - 3428286 | 37174.6 |
| udp-glucose 4-epimerase | SAMN04488524_2867 | Not Available | Positive | 3428294 - 3429316 | 37356.3 |
| hypothetical protein | SAMN04488524_2868 | Not Available | Positive | 3429317 - 3429883 | 21722.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

