Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0176 protein | SAMN04488524_2849 | Not Available | Negative | 3409221 - 3410159 | 34758.5 |
| hypothetical protein | SAMN04488524_2850 | Not Available | Positive | 3410374 - 3410874 | 19049.3 |
| bleomycin hydrolase | SAMN04488524_2851 | Not Available | Positive | 3411062 - 3412234 | 43278.1 |
| carboxypepd_reg-like domain-containing protein | SAMN04488524_2852 | Not Available | Negative | 3412299 - 3414749 | 93193.0 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMN04488524_2853 | Not Available | Positive | 3414889 - 3416076 | 43667.5 |
| phenylalanyl-trna synthetase, alpha subunit | SAMN04488524_2854 | Not Available | Positive | 3416098 - 3417144 | 39535.2 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN04488524_2855 | Not Available | Positive | 3417144 - 3417560 | 14627.6 |
| transcriptional regulator, tetr family | SAMN04488524_2856 | Not Available | Positive | 3417560 - 3418135 | 22262.9 |
| 23s rrna (uracil1939-c5)-methyltransferase | SAMN04488524_2857 | Not Available | Positive | 3418453 - 3419904 | 54549.3 |
| hypothetical protein | SAMN04488524_2858 | Not Available | Positive | 3419919 - 3420323 | 15298.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

