Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_2839 | Not Available | Positive | 3388992 - 3392324 | 122964.0 |
| starch-binding associating with outer membrane | SAMN04488524_2840 | Not Available | Positive | 3392346 - 3393743 | 51785.8 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_2841 | Not Available | Positive | 3393752 - 3394978 | 46524.5 |
| beta-glucosidase | SAMN04488524_2842 | Not Available | Negative | 3395066 - 3397375 | 84417.4 |
| hypothetical protein | SAMN04488524_2843 | Not Available | Negative | 3397388 - 3398767 | 52437.0 |
| hypothetical protein | SAMN04488524_2844 | Not Available | Negative | 3398783 - 3400450 | 61101.2 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04488524_2845 | Not Available | Negative | 3400503 - 3401426 | 33358.4 |
| starch-binding associating with outer membrane | SAMN04488524_2846 | Not Available | Negative | 3401443 - 3402993 | 56994.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_2847 | Not Available | Negative | 3403014 - 3406043 | 109279.0 |
| y_y_y domain-containing protein | SAMN04488524_2848 | Not Available | Negative | 3406305 - 3409205 | 110174.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

