Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexosaminidase | SAMN04488524_2819 | Not Available | Negative | 3367511 - 3369490 | 74469.4 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04488524_2820 | Not Available | Negative | 3369496 - 3370902 | 50736.9 |
| aspartate-semialdehyde dehydrogenase | SAMN04488524_2821 | Not Available | Negative | 3370907 - 3371899 | 36180.9 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488524_2822 | Not Available | Negative | 3372057 - 3372938 | 32735.0 |
| hydroxypyruvate isomerase | SAMN04488524_2823 | Not Available | Negative | 3372949 - 3373830 | 32691.5 |
| nucleoside transporter | SAMN04488524_2824 | Not Available | Negative | 3373842 - 3375056 | 44448.3 |
| protein of unknown function | SAMN04488524_2825 | Not Available | Negative | 3375089 - 3375784 | 25776.5 |
| predicted dehydrogenase | SAMN04488524_2826 | Not Available | Negative | 3375817 - 3377274 | 53911.2 |
| cytochrome c | SAMN04488524_2827 | Not Available | Negative | 3377290 - 3377691 | 13933.7 |
| sugar phosphate isomerase/epimerase | SAMN04488524_2828 | Not Available | Negative | 3377700 - 3378755 | 39630.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

