Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN04488524_0248 | Not Available | Negative | 364171 - 364953 | 29630.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0249 | Not Available | Positive | 365134 - 365733 | 23424.6 |
| fecr family protein | SAMN04488524_0250 | Not Available | Positive | 365830 - 367032 | 44398.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0251 | Not Available | Positive | 367308 - 370568 | 119526.0 |
| susd family protein | SAMN04488524_0252 | Not Available | Positive | 370595 - 372028 | 52520.6 |
| protein of unknown function | SAMN04488524_0253 | Not Available | Positive | 372042 - 372782 | 27470.9 |
| pkd-like family protein | SAMN04488524_0254 | Not Available | Positive | 372823 - 374214 | 51941.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_0255 | Not Available | Positive | 374236 - 375396 | 43066.9 |
| Trna-pro | Not Available | Not Available | Positive | 375647 - 375723 | Not Available |
| Trna-pro | Not Available | Not Available | Positive | 375772 - 375848 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

