Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN04488524_2809 | Not Available | Positive | 3359558 - 3360487 | 35454.4 |
| putative bacilliredoxin, yphp/yqiw family | SAMN04488524_2810 | Not Available | Positive | 3360611 - 3361021 | 14849.0 |
| tigr00159 family protein | SAMN04488524_2811 | Not Available | Negative | 3361164 - 3361955 | 29910.1 |
| dihydropteroate synthase | SAMN04488524_2812 | Not Available | Negative | 3361966 - 3362829 | 31612.6 |
| protein of unknown function | SAMN04488524_2813 | Not Available | Positive | 3362902 - 3363444 | 20668.9 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN04488524_2814 | Not Available | Positive | 3363444 - 3364595 | 42687.4 |
| peptide/nickel transport system permease protein | SAMN04488524_2815 | Not Available | Positive | 3364598 - 3365653 | 38957.3 |
| shikimate kinase | SAMN04488524_2816 | Not Available | Positive | 3365657 - 3366160 | 18406.2 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN04488524_2817 | Not Available | Negative | 3366163 - 3366618 | 16832.4 |
| trna pseudouridine38-40 synthase | SAMN04488524_2818 | Not Available | Negative | 3366699 - 3367508 | 31609.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

