Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN04488524_2759 | Not Available | Positive | 3303752 - 3304390 | 24370.3 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04488524_2760 | Not Available | Positive | 3304612 - 3305946 | 48508.8 |
| galactonate dehydratase | SAMN04488524_2761 | Not Available | Positive | 3305949 - 3307127 | 44133.9 |
| glucose 1-dehydrogenase | SAMN04488524_2762 | Not Available | Positive | 3307146 - 3307919 | 27633.6 |
| neutral/alkaline non-lysosomal ceramidase, n-terminal | SAMN04488524_2763 | Not Available | Positive | 3307916 - 3309277 | 49607.6 |
| solute:na+ symporter, sss family | SAMN04488524_2764 | Not Available | Positive | 3309288 - 3310859 | 57473.9 |
| mn2+ and fe2+ transporters of the nramp family | SAMN04488524_2765 | Not Available | Positive | 3310949 - 3312154 | 42840.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488524_2766 | Not Available | Positive | 3312183 - 3313199 | 36825.0 |
| dihydrodipicolinate synthase/n-acetylneuraminate lyase | SAMN04488524_2767 | Not Available | Positive | 3313203 - 3314270 | 39289.8 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488524_2768 | Not Available | Positive | 3314267 - 3315760 | 54185.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

