Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate dehydrogenase e1 component | SAMN04488524_2739 | Not Available | Positive | 3273375 - 3276170 | 105372.0 |
| 2-oxoglutarate dehydrogenase e2 component | SAMN04488524_2740 | Not Available | Positive | 3276189 - 3277418 | 43512.6 |
| protein of unknown function | SAMN04488524_2741 | Not Available | Positive | 3277521 - 3278225 | 27613.9 |
| peptidase family m1 | SAMN04488524_2742 | Not Available | Negative | 3278222 - 3279883 | 63268.7 |
| hypothetical protein | SAMN04488524_2743 | Not Available | Negative | 3279890 - 3281767 | 71280.3 |
| dihydrolipoamide dehydrogenase | SAMN04488524_2744 | Not Available | Positive | 3281796 - 3283259 | 52418.8 |
| hypothetical protein | SAMN04488524_2745 | Not Available | Negative | 3283501 - 3284325 | 30887.9 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN04488524_2746 | Not Available | Negative | 3284425 - 3287619 | 116403.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488524_2747 | Not Available | Negative | 3287627 - 3288694 | 38253.1 |
| outer membrane protein tolc | SAMN04488524_2748 | Not Available | Negative | 3288691 - 3290034 | 49898.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

