Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488524_0238 | Not Available | Negative | 355605 - 356804 | 44906.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0239 | Not Available | Negative | 356871 - 357431 | 21897.5 |
| arginase | SAMN04488524_0240 | Not Available | Negative | 357528 - 358487 | 35364.9 |
| ornithine--oxo-acid transaminase | SAMN04488524_0241 | Not Available | Negative | 358494 - 359750 | 45416.8 |
| lrp/asnc family transcriptional regulator, regulator for asna, asnc and gida | SAMN04488524_0242 | Not Available | Positive | 359892 - 360344 | 17126.8 |
| hypothetical protein | SAMN04488524_0243 | Not Available | Positive | 360427 - 360933 | 19342.7 |
| fecr family protein | SAMN04488524_0244 | Not Available | Negative | 360937 - 362112 | 44171.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_0245 | Not Available | Negative | 362182 - 362769 | 22934.8 |
| hypothetical protein | SAMN04488524_0246 | Not Available | Positive | 362951 - 363364 | 15843.4 |
| dihydrofolate reductase | SAMN04488524_0247 | Not Available | Negative | 363570 - 364106 | 19814.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

