Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2709 | Not Available | Negative | 3221442 - 3221753 | 11167.5 |
| transcriptional regulator, badm/rrf2 family | SAMN04488524_2710 | Not Available | Positive | 3222038 - 3222475 | 16291.0 |
| subtilase family protein | SAMN04488524_2711 | Not Available | Positive | 3222607 - 3224202 | 57741.2 |
| hypothetical protein | SAMN04488524_2712 | Not Available | Negative | 3224258 - 3226804 | 98866.3 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488524_2713 | Not Available | Positive | 3227107 - 3237726 | 360990.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488524_2714 | Not Available | Positive | 3237821 - 3238816 | 35653.6 |
| wd40-like beta propeller repeat | SAMN04488524_2715 | Not Available | Positive | 3238819 - 3240849 | 76316.4 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488524_2716 | Not Available | Positive | 3240998 - 3244579 | 129101.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488524_2717 | Not Available | Negative | 3244596 - 3245606 | 37119.7 |
| hypothetical protein | SAMN04488524_2718 | Not Available | Positive | 3245700 - 3245897 | 7543.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

