Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family with amidase-like domain | SAMN04488524_2699 | Not Available | Positive | 3207860 - 3208852 | 37305.8 |
| hypothetical protein | SAMN04488524_2700 | Not Available | Positive | 3208889 - 3209743 | 32221.8 |
| hypothetical protein | SAMN04488524_2701 | Not Available | Positive | 3209800 - 3210297 | 18020.7 |
| hypothetical protein | SAMN04488524_2702 | Not Available | Negative | 3210302 - 3211024 | 27883.4 |
| predicted arabinose efflux permease, mfs family | SAMN04488524_2703 | Not Available | Negative | 3211055 - 3212284 | 45057.7 |
| lysr family transcriptional regulator, cyn operon transcriptional activator | SAMN04488524_2704 | Not Available | Positive | 3212398 - 3213282 | 33052.6 |
| pectate lyase superfamily protein | SAMN04488524_2705 | Not Available | Negative | 3213263 - 3216232 | 108286.0 |
| patatin-like phospholipase | SAMN04488524_2706 | Not Available | Positive | 3216361 - 3217455 | 40589.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488524_2707 | Not Available | Positive | 3217546 - 3220032 | 94503.9 |
| two-component system, ntrc family, response regulator hydg | SAMN04488524_2708 | Not Available | Negative | 3220017 - 3221345 | 49390.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

