Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2659 | Not Available | Positive | 3167621 - 3168235 | 23631.5 |
| 2-oxoisovalerate dehydrogenase e1 component | SAMN04488524_2660 | Not Available | Negative | 3168238 - 3170214 | 73404.2 |
| l-lactate dehydrogenase complex protein lldf | SAMN04488524_2661 | Not Available | Negative | 3170217 - 3171605 | 52512.6 |
| peptidase family m28 | SAMN04488524_2662 | Not Available | Negative | 3171704 - 3173293 | 58443.9 |
| ribose 5-phosphate isomerase b | SAMN04488524_2663 | Not Available | Negative | 3173305 - 3173745 | 15911.8 |
| sec-independent protein translocase protein tatc | SAMN04488524_2664 | Not Available | Negative | 3173776 - 3174669 | 33344.7 |
| acetyl-coa carboxylase, biotin carboxylase subunit | SAMN04488524_2665 | Not Available | Negative | 3174780 - 3176123 | 49686.5 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN04488524_2666 | Not Available | Negative | 3176138 - 3176611 | 16933.5 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04488524_2667 | Not Available | Negative | 3176685 - 3177674 | 35808.8 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN04488524_2668 | Not Available | Negative | 3177686 - 3178624 | 33323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

