Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase protein tata | SAMN04488524_2649 | Not Available | Positive | 3150913 - 3151116 | 7253.04 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | SAMN04488524_2650 | Not Available | Positive | 3151157 - 3152614 | 52694.9 |
| membrane-bound lytic murein transglycosylase d | SAMN04488524_2651 | Not Available | Positive | 3152689 - 3153909 | 45994.5 |
| allosteric nadp-dependent malic enzyme | SAMN04488524_2652 | Not Available | Positive | 3154014 - 3156329 | 84814.2 |
| holliday junction dna helicase subunit ruva | SAMN04488524_2653 | Not Available | Positive | 3156333 - 3156917 | 21112.8 |
| protein involved in gliding motility spra | SAMN04488524_2654 | Not Available | Positive | 3156960 - 3164123 | 269551.0 |
| glycine cleavage system h protein | SAMN04488524_2655 | Not Available | Positive | 3164221 - 3164601 | 13702.0 |
| vanz like family protein | SAMN04488524_2656 | Not Available | Positive | 3164605 - 3165012 | 15737.4 |
| ferrous iron transport protein a | SAMN04488524_2657 | Not Available | Positive | 3165265 - 3165480 | 7619.62 |
| ferrous iron transport protein b | SAMN04488524_2658 | Not Available | Positive | 3165493 - 3167601 | 77869.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

