Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth domain-containing protein | SAMN04488524_2639 | Not Available | Negative | 3142085 - 3142777 | 27162.1 |
| cytosine/adenosine deaminase | SAMN04488524_2640 | Not Available | Positive | 3142851 - 3144029 | 43799.3 |
| enoyl-[acyl-carrier protein] reductase ii | SAMN04488524_2641 | Not Available | Positive | 3144044 - 3144985 | 33284.8 |
| acylphosphatase | SAMN04488524_2642 | Not Available | Positive | 3145020 - 3145301 | 10537.5 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488524_2643 | Not Available | Positive | 3145303 - 3146775 | 55776.6 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN04488524_2644 | Not Available | Positive | 3146792 - 3147223 | 15540.6 |
| tetratricopeptide repeat-containing protein | SAMN04488524_2645 | Not Available | Positive | 3147227 - 3148285 | 39826.0 |
| protein of unknown function | SAMN04488524_2646 | Not Available | Positive | 3148263 - 3149054 | 29513.1 |
| septal ring factor envc, activator of murein hydrolases amia and amib | SAMN04488524_2647 | Not Available | Positive | 3149077 - 3150384 | 47988.0 |
| sec-independent protein translocase protein tata | SAMN04488524_2648 | Not Available | Positive | 3150441 - 3150902 | 16830.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

