Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2609 | Not Available | Positive | 3097896 - 3098993 | 41610.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2610 | Not Available | Positive | 3098990 - 3100111 | 41656.5 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04488524_2611 | Not Available | Positive | 3100118 - 3102082 | 74597.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2612 | Not Available | Positive | 3102084 - 3103307 | 46475.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488524_2613 | Not Available | Positive | 3103297 - 3104202 | 32980.0 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN04488524_2614 | Not Available | Positive | 3104204 - 3105151 | 36242.7 |
| ndp-sugar epimerase, includes udp-glcnac-inverting 4,6-dehydratase flaa1 and capsular polysaccharide biosynthesis protein epsc | SAMN04488524_2615 | Not Available | Positive | 3105258 - 3107210 | 73121.3 |
| hypothetical protein | SAMN04488524_2616 | Not Available | Positive | 3107213 - 3108820 | 61386.6 |
| dtdp-4-dehydrorhamnose reductase | SAMN04488524_2617 | Not Available | Positive | 3108856 - 3109710 | 31352.6 |
| hypothetical protein | SAMN04488524_2618 | Not Available | Negative | 3109707 - 3110363 | 25334.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

