Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN04488524_2599 | Not Available | Positive | 3087446 - 3088714 | 47200.7 |
| udp-n-acetylglucosamine 4-epimerase | SAMN04488524_2600 | Not Available | Positive | 3088716 - 3089708 | 36537.3 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN04488524_2601 | Not Available | Positive | 3089761 - 3091215 | 55150.8 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | SAMN04488524_2602 | Not Available | Positive | 3091227 - 3092309 | 40934.9 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | SAMN04488524_2603 | Not Available | Positive | 3092314 - 3092967 | 23416.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2604 | Not Available | Positive | 3092985 - 3093914 | 36194.3 |
| hexapeptide repeat of succinyl-transferase | SAMN04488524_2605 | Not Available | Positive | 3093911 - 3094369 | 16479.3 |
| hypothetical protein | SAMN04488524_2606 | Not Available | Positive | 3094374 - 3095576 | 46201.1 |
| hexapeptide repeat of succinyl-transferase | SAMN04488524_2607 | Not Available | Positive | 3095578 - 3096114 | 19925.1 |
| asparagine synthase (glutamine-hydrolysing) | SAMN04488524_2608 | Not Available | Positive | 3096116 - 3097936 | 69243.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

