Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin component higa of the higab toxin-antitoxin module, contains an n-terminal hth domain | SAMN04488524_2589 | Not Available | Positive | 3079178 - 3079564 | 14281.5 |
| hypothetical protein | SAMN04488524_2590 | Not Available | Positive | 3079619 - 3079831 | 7967.34 |
| hypothetical protein | SAMN04488524_2591 | Not Available | Positive | 3079824 - 3080279 | 17213.3 |
| hypothetical protein | SAMN04488524_2592 | Not Available | Positive | 3080471 - 3080764 | 11253.5 |
| hypothetical protein | SAMN04488524_2593 | Not Available | Positive | 3080813 - 3081202 | 14747.8 |
| thiosulfate dehydrogenase | SAMN04488524_2594 | Not Available | Positive | 3081255 - 3082265 | 37193.6 |
| helix-turn-helix domain-containing protein | SAMN04488524_2595 | Not Available | Negative | 3082455 - 3082802 | 13301.5 |
| hypothetical protein | SAMN04488524_2596 | Not Available | Positive | 3083004 - 3083693 | 25501.6 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN04488524_2597 | Not Available | Positive | 3083850 - 3086339 | 91541.6 |
| chain length determinant protein | SAMN04488524_2598 | Not Available | Positive | 3086350 - 3087453 | 41209.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

