Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2578 | Not Available | Negative | 3064609 - 3064836 | 8689.25 |
| hypothetical protein | SAMN04488524_2579 | Not Available | Negative | 3064878 - 3066185 | 50614.2 |
| helix-turn-helix | SAMN04488524_2580 | Not Available | Positive | 3066546 - 3066878 | 12530.6 |
| hypothetical protein | SAMN04488524_2581 | Not Available | Positive | 3067029 - 3067682 | 23377.9 |
| hypothetical protein | SAMN04488524_2582 | Not Available | Positive | 3067962 - 3068975 | 36769.9 |
| yd repeat-containing protein | SAMN04488524_2583 | Not Available | Positive | 3068986 - 3072423 | 127338.0 |
| rhs repeat-associated core domain-containing protein | SAMN04488524_2584 | Not Available | Positive | 3072435 - 3075947 | 127874.0 |
| hypothetical protein | SAMN04488524_2585 | Not Available | Positive | 3075964 - 3076323 | 13917.3 |
| hypothetical protein | SAMN04488524_2587 | Not Available | Negative | 3078255 - 3078719 | 16953.8 |
| mrna interferase higb | SAMN04488524_2588 | Not Available | Positive | 3078880 - 3079173 | 11546.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

