Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2546 | Not Available | Positive | 3031851 - 3032546 | 25920.6 |
| hypothetical protein | SAMN04488524_2548 | Not Available | Positive | 3033032 - 3033253 | 8334.24 |
| hypothetical protein | SAMN04488524_2549 | Not Available | Positive | 3033531 - 3033887 | 13986.8 |
| hypothetical protein | SAMN04488524_2551 | Not Available | Positive | 3034259 - 3034756 | 18870.8 |
| hypothetical protein | SAMN04488524_2552 | Not Available | Positive | 3034908 - 3035132 | 8790.88 |
| glycosyl hydrolases family 43 | SAMN04488524_2553 | Not Available | Positive | 3035415 - 3036317 | 33382.2 |
| antitoxin component higa of the higab toxin-antitoxin module, contains an n-terminal hth domain | SAMN04488524_2554 | Not Available | Positive | 3036619 - 3037005 | 14324.5 |
| hypothetical protein | SAMN04488524_2555 | Not Available | Positive | 3037379 - 3038227 | 30387.2 |
| hypothetical protein | SAMN04488524_2556 | Not Available | Positive | 3038237 - 3039337 | 39449.4 |
| hypothetical protein | SAMN04488524_2557 | Not Available | Positive | 3039334 - 3040179 | 30791.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

