Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2486 | Not Available | Positive | 2955475 - 2957955 | 91876.3 |
| udp-2,3-diacylglucosamine pyrophosphatase lpxh | SAMN04488524_2487 | Not Available | Positive | 2958212 - 2959072 | 33256.3 |
| conserved hypothetical protein | SAMN04488524_2488 | Not Available | Positive | 2959102 - 2960088 | 37336.0 |
| hypothetical protein | SAMN04488524_2489 | Not Available | Positive | 2960112 - 2961092 | 38414.6 |
| type iii pantothenate kinase | SAMN04488524_2490 | Not Available | Positive | 2961167 - 2961931 | 27958.6 |
| long-chain fatty acid transport protein | SAMN04488524_2491 | Not Available | Positive | 2961894 - 2963207 | 48188.4 |
| lipopolysaccharide-assembly, lptc-related | SAMN04488524_2492 | Not Available | Positive | 2963207 - 2963776 | 21073.2 |
| peptidyl-prolyl cis-trans isomerase d | SAMN04488524_2493 | Not Available | Positive | 2963906 - 2965999 | 75679.2 |
| protein of unknown function | SAMN04488524_2494 | Not Available | Positive | 2966064 - 2966579 | 19284.4 |
| protein of unknown function | SAMN04488524_2495 | Not Available | Positive | 2966608 - 2967384 | 29632.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

