Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2466 | Not Available | Negative | 2935706 - 2936893 | 45058.8 |
| gmp synthase-glutamine amidotransferase | SAMN04488524_2467 | Not Available | Negative | 2936895 - 2937725 | 31730.0 |
| carboxylate-amine ligase | SAMN04488524_2468 | Not Available | Negative | 2937731 - 2938834 | 42293.6 |
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN04488524_2469 | Not Available | Negative | 2938862 - 2939869 | 38183.4 |
| esterase/lipase superfamily enzyme | SAMN04488524_2470 | Not Available | Negative | 2939928 - 2940635 | 27642.7 |
| enterochelin esterase | SAMN04488524_2471 | Not Available | Positive | 2940811 - 2941638 | 31278.7 |
| gtp-binding protein | SAMN04488524_2472 | Not Available | Positive | 2941731 - 2943536 | 67339.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2473 | Not Available | Negative | 2943599 - 2944348 | 28693.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2474 | Not Available | Negative | 2944364 - 2945635 | 47477.1 |
| methyltransferase domain-containing protein | SAMN04488524_2475 | Not Available | Positive | 2945800 - 2946549 | 28910.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

