Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic pyrophosphatase | SAMN04488524_2455 | Not Available | Positive | 2926976 - 2927524 | 20822.9 |
| hemolysin, contains cbs domains | SAMN04488524_2456 | Not Available | Positive | 2927525 - 2928841 | 49044.5 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN04488524_2457 | Not Available | Positive | 2928852 - 2929556 | 26566.0 |
| protein of unknown function | SAMN04488524_2458 | Not Available | Positive | 2929553 - 2930206 | 24627.5 |
| biotin carboxyl carrier protein | SAMN04488524_2459 | Not Available | Positive | 2930216 - 2930713 | 18463.3 |
| gliding motility-associated lipoprotein gldj | SAMN04488524_2460 | Not Available | Negative | 2930758 - 2932347 | 59538.8 |
| hypothetical protein | SAMN04488524_2461 | Not Available | Positive | 2932578 - 2933759 | 42617.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN04488524_2462 | Not Available | Positive | 2933791 - 2934267 | 17286.1 |
| polyisoprenoid-binding protein ycei | SAMN04488524_2463 | Not Available | Negative | 2934269 - 2934799 | 19125.3 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488524_2464 | Not Available | Negative | 2934889 - 2935479 | 22832.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

