Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f5/8 type c domain-containing protein | SAMN04488524_2425 | Not Available | Positive | 2895937 - 2897055 | 41401.4 |
| glycosyl hydrolase family 88 | SAMN04488524_2426 | Not Available | Positive | 2897057 - 2898262 | 45734.4 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN04488524_2427 | Not Available | Positive | 2898288 - 2901956 | 137777.0 |
| hypothetical protein | SAMN04488524_2428 | Not Available | Negative | 2902021 - 2902368 | 13077.5 |
| methionine adenosyltransferase | SAMN04488524_2429 | Not Available | Negative | 2902692 - 2903942 | 46175.9 |
| lipid kinase, yegs/rv2252/bmru family | SAMN04488524_2430 | Not Available | Positive | 2904175 - 2905065 | 32574.4 |
| translation initiation factor 1 | SAMN04488524_2431 | Not Available | Positive | 2905055 - 2905408 | 12672.3 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN04488524_2432 | Not Available | Positive | 2905553 - 2907157 | 58958.0 |
| outer membrane transport energization protein exbb | SAMN04488524_2433 | Not Available | Positive | 2907431 - 2908270 | 29723.5 |
| outer membrane transport energization protein exbd | SAMN04488524_2434 | Not Available | Positive | 2908354 - 2908971 | 22790.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

