Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate-binding family 9 | SAMN04488524_2415 | Not Available | Negative | 2875298 - 2875933 | 24078.7 |
| right handed beta helix region | SAMN04488524_2416 | Not Available | Negative | 2875930 - 2878092 | 81438.5 |
| hypothetical protein | SAMN04488524_2417 | Not Available | Negative | 2878111 - 2880816 | 102785.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_2418 | Not Available | Positive | 2881151 - 2884321 | 116308.0 |
| starch-binding associating with outer membrane | SAMN04488524_2419 | Not Available | Positive | 2884336 - 2885973 | 61674.8 |
| beta-glucosidase | SAMN04488524_2420 | Not Available | Positive | 2886066 - 2888285 | 81571.2 |
| hypothetical protein | SAMN04488524_2421 | Not Available | Positive | 2888282 - 2889553 | 47529.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_2422 | Not Available | Positive | 2889567 - 2892788 | 119424.0 |
| starch-binding associating with outer membrane | SAMN04488524_2423 | Not Available | Positive | 2892800 - 2894728 | 73409.3 |
| protein of unknown function | SAMN04488524_2424 | Not Available | Positive | 2894753 - 2895919 | 42796.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

