Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | SAMN04488524_2404 | Not Available | Positive | 2861495 - 2862640 | 41364.5 |
| hypothetical protein | SAMN04488524_2405 | Not Available | Positive | 2862812 - 2863306 | 19067.9 |
| phosphoribosylamine--glycine ligase | SAMN04488524_2407 | Not Available | Negative | 2863679 - 2864953 | 45459.4 |
| solute:na+ symporter, sss family | SAMN04488524_2408 | Not Available | Negative | 2865033 - 2866721 | 61533.7 |
| glucose/galactose transporter | SAMN04488524_2409 | Not Available | Negative | 2866757 - 2868034 | 46296.2 |
| xylose isomerase-like tim barrel | SAMN04488524_2410 | Not Available | Negative | 2868024 - 2868836 | 31030.0 |
| ectoine hydroxylase-related dioxygenase, phytanoyl-coa dioxygenase (phyh) family | SAMN04488524_2411 | Not Available | Negative | 2868838 - 2869740 | 34700.1 |
| hypothetical protein | SAMN04488524_2412 | Not Available | Negative | 2869765 - 2872905 | 121246.0 |
| transcriptional regulator, laci family | SAMN04488524_2413 | Not Available | Positive | 2873255 - 2874331 | 41271.6 |
| methyltransferase domain-containing protein | SAMN04488524_2414 | Not Available | Negative | 2874353 - 2875261 | 34704.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

