Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groel | SAMN04488524_2384 | Not Available | Negative | 2836950 - 2838593 | 57643.4 |
| chaperonin groes | SAMN04488524_2385 | Not Available | Negative | 2838636 - 2838926 | 10170.2 |
| preprotein translocase subunit secg | SAMN04488524_2386 | Not Available | Negative | 2839152 - 2839499 | 11542.4 |
| hypothetical protein | SAMN04488524_2387 | Not Available | Negative | 2839514 - 2840644 | 43130.6 |
| lipopolysaccharide-assembly | SAMN04488524_2388 | Not Available | Negative | 2840678 - 2841178 | 18434.2 |
| regulatory protein, fis family | SAMN04488524_2389 | Not Available | Negative | 2841181 - 2842416 | 45980.9 |
| pp_02342 | SAMN04488524_2390 | Not Available | Negative | 2842429 - 2843868 | Not Available |
| hypothetical protein | SAMN04488524_2391 | Not Available | Positive | 2844166 - 2845173 | 38757.6 |
| hypothetical protein | SAMN04488524_2392 | Not Available | Positive | 2845227 - 2845703 | 17038.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_2393 | Not Available | Positive | 2845711 - 2846319 | 23773.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

