Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2354 | Not Available | Negative | 2802052 - 2802225 | 6240.78 |
| histidine kinase | SAMN04488524_2355 | Not Available | Positive | 2802494 - 2803528 | 39641.5 |
| two component transcriptional regulator, lyttr family | SAMN04488524_2356 | Not Available | Positive | 2803525 - 2804274 | 28451.7 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04488524_2357 | Not Available | Negative | 2804271 - 2805026 | 28557.2 |
| nudix domain-containing protein | SAMN04488524_2358 | Not Available | Negative | 2805047 - 2805601 | 20871.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488524_2359 | Not Available | Negative | 2805636 - 2808071 | 89725.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488524_2360 | Not Available | Negative | 2808087 - 2810576 | 92681.2 |
| thioredoxin | SAMN04488524_2361 | Not Available | Positive | 2810672 - 2811277 | 22715.5 |
| atp-dependent clp protease adaptor protein clps | SAMN04488524_2362 | Not Available | Negative | 2811274 - 2811555 | 10898.0 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04488524_2363 | Not Available | Positive | 2811631 - 2812680 | 38376.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

