Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna modification/repair radical sam protein | SAMN04488524_2334 | Not Available | Negative | 2774363 - 2775619 | 47576.7 |
| uncharacterized protein | SAMN04488524_2335 | Not Available | Negative | 2775678 - 2776313 | 23948.6 |
| putative n6-adenine-specific dna methylase | SAMN04488524_2336 | Not Available | Negative | 2776326 - 2777510 | 44469.5 |
| protein of unknown function | SAMN04488524_2337 | Not Available | Positive | 2777583 - 2777951 | 13612.8 |
| iron complex outermembrane recepter protein | SAMN04488524_2338 | Not Available | Positive | 2778224 - 2780734 | 92001.9 |
| uncharacterized iron-regulated membrane protein | SAMN04488524_2339 | Not Available | Positive | 2780741 - 2781937 | 44591.6 |
| hypothetical protein | SAMN04488524_2340 | Not Available | Negative | 2781930 - 2782631 | 26022.7 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04488524_2341 | Not Available | Positive | 2782762 - 2784606 | 70033.8 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488524_2342 | Not Available | Positive | 2784603 - 2785298 | 26541.4 |
| glpgli family protein | SAMN04488524_2343 | Not Available | Negative | 2785295 - 2786065 | 28641.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

