Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atpase | SAMN04488524_2324 | Not Available | Negative | 2763720 - 2765000 | 47289.1 |
| superfamily ii dna and rna helicase | SAMN04488524_2325 | Not Available | Negative | 2765044 - 2766294 | 46538.8 |
| protein of unknown function | SAMN04488524_2326 | Not Available | Negative | 2766347 - 2767105 | 26833.7 |
| von willebrand factor type a domain-containing protein | SAMN04488524_2327 | Not Available | Negative | 2767102 - 2768670 | 57736.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_2328 | Not Available | Positive | 2768802 - 2769380 | 22592.3 |
| carboxypepd_reg-like domain-containing protein | SAMN04488524_2329 | Not Available | Positive | 2769373 - 2770686 | 47428.1 |
| inorganic phosphate transporter, pit family | SAMN04488524_2330 | Not Available | Negative | 2770749 - 2771765 | 35700.3 |
| hypothetical protein | SAMN04488524_2331 | Not Available | Negative | 2771776 - 2772417 | 24014.8 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN04488524_2332 | Not Available | Negative | 2772504 - 2773571 | 41115.0 |
| probable dna metabolism protein | SAMN04488524_2333 | Not Available | Negative | 2773581 - 2774351 | 30431.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

