Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidyl-trna synthetase | SAMN04488524_2314 | Not Available | Positive | 2752558 - 2753940 | 50985.7 |
| response regulator receiver domain-containing protein | SAMN04488524_2315 | Not Available | Negative | 2753937 - 2754350 | 15463.9 |
| iron complex outermembrane recepter protein | SAMN04488524_2316 | Not Available | Positive | 2754923 - 2757223 | 84251.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488524_2317 | Not Available | Positive | 2757388 - 2758347 | 35885.5 |
| hypothetical protein | SAMN04488524_2318 | Not Available | Negative | 2758349 - 2759134 | 29873.8 |
| predicted dehydrogenase | SAMN04488524_2319 | Not Available | Negative | 2759138 - 2760151 | 37793.1 |
| hypothetical protein | SAMN04488524_2320 | Not Available | Positive | 2760282 - 2760629 | 13495.5 |
| outer membrane protein ompa | SAMN04488524_2321 | Not Available | Negative | 2760702 - 2761382 | 23233.9 |
| abc-2 type transport system atp-binding protein | SAMN04488524_2322 | Not Available | Negative | 2761546 - 2762241 | 26042.3 |
| hypothetical protein | SAMN04488524_2323 | Not Available | Negative | 2762246 - 2763718 | 56554.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

