Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lao/ao transport system kinase | SAMN04488524_2294 | Not Available | Positive | 2731980 - 2732870 | 32292.0 |
| ompa-ompf porin, oop family | SAMN04488524_2295 | Not Available | Positive | 2733210 - 2734544 | 47108.2 |
| hypothetical protein | SAMN04488524_2296 | Not Available | Positive | 2734621 - 2734758 | 5342.91 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN04488524_2297 | Not Available | Positive | 2734768 - 2735148 | 13671.4 |
| chloramphenicol-sensitive protein rard | SAMN04488524_2298 | Not Available | Positive | 2735152 - 2736081 | 35081.3 |
| atp-dependent dna helicase recg | SAMN04488524_2299 | Not Available | Positive | 2736086 - 2738191 | 79898.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488524_2300 | Not Available | Negative | 2738192 - 2739427 | 47161.7 |
| fumarase, class ii | SAMN04488524_2301 | Not Available | Positive | 2739579 - 2740976 | 49715.8 |
| hypothetical protein | SAMN04488524_2302 | Not Available | Positive | 2740937 - 2741491 | 21115.3 |
| s1/p1 nuclease | SAMN04488524_2303 | Not Available | Positive | 2741494 - 2742300 | 30560.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

