Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase, fkbm family | SAMN04488524_2284 | Not Available | Positive | 2720546 - 2721343 | 30563.6 |
| glycosyltransferase like family protein | SAMN04488524_2285 | Not Available | Positive | 2721374 - 2722258 | 33783.8 |
| glycosyltransferase, gt2 family | SAMN04488524_2286 | Not Available | Negative | 2722277 - 2724496 | 84655.9 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2287 | Not Available | Negative | 2724501 - 2725448 | 36870.0 |
| glycosyl transferase family 2 | SAMN04488524_2288 | Not Available | Positive | 2725479 - 2726486 | 37672.8 |
| hypothetical protein | SAMN04488524_2289 | Not Available | Negative | 2726472 - 2727419 | 37353.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2290 | Not Available | Negative | 2727416 - 2728519 | 42007.6 |
| glycosyl transferase family 2 | SAMN04488524_2291 | Not Available | Negative | 2728509 - 2729249 | 28598.2 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488524_2292 | Not Available | Negative | 2729230 - 2730015 | 29588.6 |
| atp-binding cassette, subfamily b, msba | SAMN04488524_2293 | Not Available | Negative | 2730030 - 2731850 | 67797.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

