Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate 1-decarboxylase | SAMN04488524_2274 | Not Available | Positive | 2709998 - 2710348 | 12919.8 |
| acyl-coa dehydrogenase | SAMN04488524_2275 | Not Available | Positive | 2710475 - 2711584 | 40397.5 |
| putative membrane protein | SAMN04488524_2276 | Not Available | Negative | 2711745 - 2712092 | 12101.5 |
| hypothetical protein | SAMN04488524_2277 | Not Available | Positive | 2712111 - 2712545 | 15667.4 |
| hypothetical protein | SAMN04488524_2278 | Not Available | Positive | 2712761 - 2713420 | 23955.9 |
| ribosome maturation factor rimp | SAMN04488524_2279 | Not Available | Positive | 2713662 - 2714126 | 17268.9 |
| nusa antitermination factor | SAMN04488524_2280 | Not Available | Positive | 2714129 - 2715364 | 46768.8 |
| translation initiation factor if-2 | SAMN04488524_2281 | Not Available | Positive | 2715483 - 2718470 | 107776.0 |
| hypothetical protein | SAMN04488524_2282 | Not Available | Positive | 2718884 - 2719636 | 29504.8 |
| methyltransferase domain-containing protein | SAMN04488524_2283 | Not Available | Positive | 2719756 - 2720529 | 30445.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

