Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily b | SAMN04488524_2254 | Not Available | Positive | 2685358 - 2687112 | 65383.8 |
| transmembrane secretion effector | SAMN04488524_2255 | Not Available | Negative | 2687109 - 2688386 | 46331.1 |
| thiamine-phosphate diphosphorylase | SAMN04488524_2256 | Not Available | Negative | 2688422 - 2689054 | 23024.7 |
| iron complex outermembrane recepter protein | SAMN04488524_2257 | Not Available | Negative | 2689062 - 2691569 | 93193.5 |
| nicotinamide-nucleotide adenylyltransferase, nadr type | SAMN04488524_2258 | Not Available | Negative | 2691698 - 2692228 | 20209.2 |
| nicotinamide mononucleotide transporter | SAMN04488524_2259 | Not Available | Negative | 2692212 - 2692826 | 23965.3 |
| hypothetical protein | SAMN04488524_2260 | Not Available | Positive | 2693159 - 2693470 | 10970.4 |
| carbamoyl-phosphate synthase large subunit | SAMN04488524_2261 | Not Available | Positive | 2693687 - 2696503 | 104589.0 |
| protein of unknown function | SAMN04488524_2262 | Not Available | Negative | 2696543 - 2697505 | 36175.4 |
| lema protein | SAMN04488524_2263 | Not Available | Negative | 2697505 - 2698059 | 20635.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

