Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel family protein | SAMN04488524_2210 | Not Available | Negative | 2624974 - 2627553 | 98414.9 |
| hypothetical protein | SAMN04488524_2211 | Not Available | Negative | 2627793 - 2628032 | 9141.96 |
| hypothetical protein | SAMN04488524_2214 | Not Available | Negative | 2628998 - 2629639 | 23132.7 |
| hypothetical protein | SAMN04488524_2215 | Not Available | Negative | 2629795 - 2629983 | 7391.91 |
| muramoyltetrapeptide carboxypeptidase | SAMN04488524_2218 | Not Available | Negative | 2631891 - 2632793 | 33171.1 |
| methionyl-trna synthetase | SAMN04488524_2219 | Not Available | Positive | 2632834 - 2634942 | 79832.0 |
| Trna-arg | Not Available | Not Available | Positive | 2635034 - 2635105 | Not Available |
| arac-type dna-binding protein | SAMN04488524_2221 | Not Available | Positive | 2635303 - 2636484 | 44888.3 |
| conserved repeat domain-containing protein/gliding motility-associated c-terminal domain-containing protein | SAMN04488524_2222 | Not Available | Positive | 2636621 - 2651287 | 491808.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488524_2223 | Not Available | Positive | 2651340 - 2652311 | 35585.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

