Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0188 | Not Available | Negative | 279583 - 281133 | 59807.8 |
| hypothetical protein | SAMN04488524_0189 | Not Available | Negative | 281136 - 283865 | 102796.0 |
| transcriptional regulator, laci family | SAMN04488524_0190 | Not Available | Negative | 284019 - 285059 | 38386.7 |
| sugar phosphate isomerase/epimerase | SAMN04488524_0191 | Not Available | Negative | 285148 - 286029 | 32304.9 |
| fucose permease | SAMN04488524_0192 | Not Available | Negative | 286215 - 287471 | 45994.9 |
| glucokinase | SAMN04488524_0193 | Not Available | Negative | 287474 - 288406 | 32458.1 |
| signal transduction histidine kinase | SAMN04488524_0194 | Not Available | Negative | 288497 - 292567 | 154056.0 |
| choline-sulfatase | SAMN04488524_0195 | Not Available | Negative | 292609 - 293997 | 51502.8 |
| arylsulfatase a | SAMN04488524_0196 | Not Available | Negative | 294003 - 295502 | 56546.2 |
| arylsulfatase a | SAMN04488524_0197 | Not Available | Negative | 295509 - 297152 | 63346.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

