Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated lipoprotein gldh | SAMN04488524_2200 | Not Available | Positive | 2608578 - 2609045 | 17917.5 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN04488524_2201 | Not Available | Negative | 2609042 - 2610343 | 47292.7 |
| zinc carboxypeptidase | SAMN04488524_2202 | Not Available | Positive | 2610460 - 2612946 | 93271.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_2203 | Not Available | Positive | 2613225 - 2616473 | 116806.0 |
| starch-binding associating with outer membrane | SAMN04488524_2204 | Not Available | Positive | 2616502 - 2618115 | 58535.8 |
| hypothetical protein | SAMN04488524_2205 | Not Available | Positive | 2618128 - 2618643 | 18093.7 |
| hypothetical protein | SAMN04488524_2206 | Not Available | Negative | 2618646 - 2618774 | 5219.16 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_2207 | Not Available | Positive | 2619092 - 2622214 | 113673.0 |
| starch-binding associating with outer membrane | SAMN04488524_2208 | Not Available | Positive | 2622226 - 2623704 | 54401.4 |
| hypothetical protein | SAMN04488524_2209 | Not Available | Negative | 2623831 - 2624922 | 38927.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

