Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_2180 | Not Available | Positive | 2590895 - 2592202 | 47511.9 |
| hypothetical protein | SAMN04488524_2181 | Not Available | Negative | 2592216 - 2592836 | 24518.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_2182 | Not Available | Negative | 2592826 - 2593329 | 20020.0 |
| hypothetical protein | SAMN04488524_2183 | Not Available | Negative | 2593333 - 2594202 | 32195.3 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488524_2184 | Not Available | Positive | 2594384 - 2594983 | 22158.2 |
| hypothetical protein | SAMN04488524_2185 | Not Available | Positive | 2595053 - 2595451 | 15660.0 |
| hypothetical protein | SAMN04488524_2186 | Not Available | Positive | 2595505 - 2596080 | 21393.6 |
| hypothetical protein | SAMN04488524_2187 | Not Available | Positive | 2596105 - 2597538 | 54032.4 |
| hypothetical protein | SAMN04488524_2188 | Not Available | Positive | 2597584 - 2597838 | 9635.03 |
| magnesium chelatase family protein | SAMN04488524_2189 | Not Available | Negative | 2597843 - 2599384 | 56038.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

