Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_2170 | Not Available | Positive | 2578901 - 2579413 | 19783.6 |
| fecr family protein | SAMN04488524_2171 | Not Available | Positive | 2579489 - 2580685 | 44631.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_2172 | Not Available | Positive | 2580710 - 2584219 | 130745.0 |
| susd family protein | SAMN04488524_2173 | Not Available | Positive | 2584231 - 2585631 | 52458.8 |
| peroxiredoxin | SAMN04488524_2174 | Not Available | Positive | 2585632 - 2586732 | 41276.2 |
| imidazolonepropionase | SAMN04488524_2175 | Not Available | Positive | 2586739 - 2587980 | 45106.1 |
| uncharacterized conserved protein, tic20 family | SAMN04488524_2176 | Not Available | Negative | 2588028 - 2588621 | 22493.1 |
| phosphoribosyl-atp pyrophosphohydrolase | SAMN04488524_2177 | Not Available | Negative | 2588768 - 2589232 | 17677.8 |
| protein of unknown function | SAMN04488524_2178 | Not Available | Positive | 2589478 - 2590191 | 26027.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_2179 | Not Available | Positive | 2590308 - 2590898 | 22948.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

