Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mscs family membrane protein | SAMN04488524_2160 | Not Available | Positive | 2568187 - 2569311 | 42392.3 |
| phosphatidylserine decarboxylase | SAMN04488524_2161 | Not Available | Negative | 2569360 - 2570019 | 25059.5 |
| hypoxanthine phosphoribosyltransferase | SAMN04488524_2162 | Not Available | Negative | 2570061 - 2570600 | 20271.6 |
| transglycosylase | SAMN04488524_2163 | Not Available | Negative | 2570614 - 2572776 | 81751.8 |
| atp-binding protein involved in chromosome partitioning | SAMN04488524_2164 | Not Available | Positive | 2572893 - 2573984 | 38444.5 |
| fe-s cluster biogenesis protein nfua, 4fe-4s-binding domain | SAMN04488524_2165 | Not Available | Positive | 2574040 - 2574285 | 8749.77 |
| hypothetical protein | SAMN04488524_2166 | Not Available | Positive | 2574340 - 2574978 | 23923.9 |
| peptide deformylase | SAMN04488524_2167 | Not Available | Negative | 2574985 - 2575545 | 21586.1 |
| predicted zn-dependent peptidase | SAMN04488524_2168 | Not Available | Negative | 2575564 - 2576793 | 45997.4 |
| molecular chaperone htpg | SAMN04488524_2169 | Not Available | Positive | 2576920 - 2578809 | 71109.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

