Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase | SAMN04488524_2150 | Not Available | Positive | 2561630 - 2562613 | 35196.5 |
| uncharacterized conserved protein ybjq, upf0145 family | SAMN04488524_2151 | Not Available | Negative | 2562658 - 2562981 | 11148.5 |
| 5'(3')-deoxyribonucleotidase | SAMN04488524_2152 | Not Available | Negative | 2563031 - 2563594 | 21819.2 |
| small subunit ribosomal protein s16 | SAMN04488524_2153 | Not Available | Positive | 2563718 - 2564302 | 20929.5 |
| 16s rrna processing protein rimm | SAMN04488524_2154 | Not Available | Positive | 2564376 - 2564903 | 20256.1 |
| trna (guanine37-n(1)-) methyltransferase | SAMN04488524_2155 | Not Available | Positive | 2564919 - 2565596 | 25034.0 |
| hypothetical protein | SAMN04488524_2156 | Not Available | Positive | 2565789 - 2566085 | 11151.8 |
| hypothetical protein | SAMN04488524_2157 | Not Available | Positive | 2566106 - 2566375 | 10571.9 |
| large subunit ribosomal protein l19 | SAMN04488524_2158 | Not Available | Positive | 2566517 - 2566864 | 13076.0 |
| glutamate dehydrogenase/leucine dehydrogenase | SAMN04488524_2159 | Not Available | Positive | 2566955 - 2568181 | 45220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

