Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488524_2140 | Not Available | Positive | 2552241 - 2552555 | 11930.2 |
| tm2 domain-containing protein | SAMN04488524_2141 | Not Available | Positive | 2552569 - 2552928 | 13706.9 |
| dinuclear metal center protein, ybgi/sa1388 family | SAMN04488524_2142 | Not Available | Positive | 2552956 - 2554053 | 40654.8 |
| hypothetical protein | SAMN04488524_2143 | Not Available | Positive | 2554053 - 2554796 | 28533.2 |
| tpr repeat-containing protein | SAMN04488524_2144 | Not Available | Positive | 2554847 - 2556424 | 59571.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04488524_2145 | Not Available | Negative | 2556421 - 2557503 | 39277.3 |
| l-lactate dehydrogenase complex protein lldg | SAMN04488524_2146 | Not Available | Negative | 2557559 - 2558173 | 23480.3 |
| membrane protease ftsh catalytic subunit | SAMN04488524_2147 | Not Available | Negative | 2558258 - 2560351 | 77097.8 |
| ribosome-associated protein | SAMN04488524_2148 | Not Available | Negative | 2560377 - 2560751 | 14260.8 |
| bira family transcriptional regulator, biotin operon repressor / biotin-[acetyl-coa-carboxylase] ligase | SAMN04488524_2149 | Not Available | Positive | 2560793 - 2561569 | 28869.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

