Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine-phosphate kinase | SAMN04488524_2130 | Not Available | Positive | 2541993 - 2543033 | 38229.0 |
| dna recombination protein rmuc | SAMN04488524_2131 | Not Available | Negative | 2543028 - 2544362 | 50917.9 |
| hypothetical protein | SAMN04488524_2132 | Not Available | Negative | 2544413 - 2544532 | 4565.84 |
| hypothetical protein | SAMN04488524_2133 | Not Available | Positive | 2544614 - 2545306 | 25727.4 |
| apag protein | SAMN04488524_2134 | Not Available | Negative | 2545307 - 2545693 | 14594.2 |
| pp_02092 | SAMN04488524_2135 | Not Available | Negative | 2545727 - 2546734 | Not Available |
| hypothetical protein | SAMN04488524_2136 | Not Available | Positive | 2546788 - 2547696 | 34481.2 |
| phosphatidate cytidylyltransferase | SAMN04488524_2137 | Not Available | Positive | 2547693 - 2548502 | 30560.2 |
| hypothetical protein | SAMN04488524_2138 | Not Available | Negative | 2548508 - 2548720 | 8151.28 |
| transcription-repair coupling factor | SAMN04488524_2139 | Not Available | Negative | 2548730 - 2552071 | 126902.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

