Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488524_0178 | Not Available | Negative | 260959 - 261900 | 34943.8 |
| starch-binding associating with outer membrane | SAMN04488524_0179 | Not Available | Negative | 261934 - 263802 | 69562.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488524_0180 | Not Available | Negative | 263802 - 266942 | 116011.0 |
| protein of unknown function | SAMN04488524_0181 | Not Available | Negative | 267214 - 267948 | 27742.6 |
| arac-type dna-binding protein | SAMN04488524_0182 | Not Available | Positive | 268086 - 268958 | 33628.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488524_0183 | Not Available | Negative | 268960 - 269895 | 34711.9 |
| solute:na+ symporter, sss family | SAMN04488524_0184 | Not Available | Negative | 269957 - 271525 | 57289.3 |
| protein of unknown function | SAMN04488524_0185 | Not Available | Negative | 271657 - 275172 | 132007.0 |
| alpha-l-fucosidase 2 | SAMN04488524_0186 | Not Available | Negative | 275169 - 277982 | 103520.0 |
| polygalacturonase | SAMN04488524_0187 | Not Available | Negative | 278000 - 279577 | 57904.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

