Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha2 family, multidrug resistance protein | SAMN04488524_2090 | Not Available | Positive | 2493316 - 2494863 | 56372.1 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN04488524_2091 | Not Available | Positive | 2495100 - 2497688 | 98041.4 |
| hypothetical protein | SAMN04488524_2092 | Not Available | Negative | 2497771 - 2498019 | 8939.7 |
| thioredoxin | SAMN04488524_2093 | Not Available | Negative | 2498019 - 2498327 | 11382.7 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN04488524_2094 | Not Available | Negative | 2498341 - 2498973 | 23312.3 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488524_2095 | Not Available | Negative | 2499082 - 2501436 | 88806.0 |
| hypothetical protein | SAMN04488524_2096 | Not Available | Negative | 2501433 - 2502641 | 44655.9 |
| aldehyde dehydrogenase (nad+) | SAMN04488524_2097 | Not Available | Positive | 2502686 - 2504086 | 50924.9 |
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN04488524_2098 | Not Available | Negative | 2504110 - 2504937 | 30385.5 |
| polyisoprenoid-binding protein ycei | SAMN04488524_2099 | Not Available | Negative | 2504945 - 2505517 | 20907.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

