Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dinb superfamily protein | SAMN04488524_2080 | Not Available | Positive | 2485599 - 2486102 | 19158.8 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | SAMN04488524_2081 | Not Available | Positive | 2486099 - 2486521 | 15376.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488524_2082 | Not Available | Negative | 2486530 - 2487096 | 21524.2 |
| quaternary ammonium compound-resistance protein suge | SAMN04488524_2083 | Not Available | Positive | 2487200 - 2487523 | 11775.8 |
| protein of unknown function | SAMN04488524_2084 | Not Available | Negative | 2487530 - 2488084 | 20533.0 |
| hypothetical protein | SAMN04488524_2085 | Not Available | Negative | 2488113 - 2488295 | 6641.13 |
| n-terminal ig-like domain of cellulase | SAMN04488524_2086 | Not Available | Negative | 2488362 - 2490167 | 67648.0 |
| transcriptional regulator, tetr family | SAMN04488524_2087 | Not Available | Positive | 2490316 - 2490942 | 23381.8 |
| outer membrane protein tolc | SAMN04488524_2088 | Not Available | Positive | 2490935 - 2492248 | 48425.4 |
| membrane fusion protein, multidrug efflux system | SAMN04488524_2089 | Not Available | Positive | 2492269 - 2493312 | 37238.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

