Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase family m49 | SAMN04488524_2070 | Not Available | Positive | 2473263 - 2474945 | 62465.1 |
| two-component system, cell cycle response regulator divk | SAMN04488524_2071 | Not Available | Negative | 2474948 - 2475310 | 13351.8 |
| cheb methylesterase | SAMN04488524_2072 | Not Available | Negative | 2475330 - 2475893 | 20071.3 |
| chemotaxis protein methyltransferase cher | SAMN04488524_2073 | Not Available | Negative | 2475893 - 2476717 | 31772.2 |
| response regulator receiver domain-containing protein | SAMN04488524_2074 | Not Available | Negative | 2476726 - 2477094 | 13093.1 |
| signal transduction histidine kinase | SAMN04488524_2075 | Not Available | Negative | 2477096 - 2480686 | 133851.0 |
| signal transduction histidine kinase | SAMN04488524_2076 | Not Available | Negative | 2480698 - 2481822 | 42223.3 |
| hypothetical protein | SAMN04488524_2077 | Not Available | Negative | 2481939 - 2482778 | 30412.7 |
| glutamyl-trna synthetase | SAMN04488524_2078 | Not Available | Negative | 2482848 - 2484398 | 57629.0 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488524_2079 | Not Available | Positive | 2484404 - 2485621 | 46646.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

