Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_02007 | SAMN04488524_2050 | Not Available | Negative | 2455349 - 2455684 | Not Available |
| threonine/homoserine/homoserine lactone efflux protein | SAMN04488524_2051 | Not Available | Positive | 2455770 - 2456405 | 23258.4 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04488524_2052 | Not Available | Positive | 2456431 - 2457615 | 44232.1 |
| hypothetical protein | SAMN04488524_2053 | Not Available | Negative | 2457622 - 2457861 | 8788.97 |
| predicted arabinose efflux permease, mfs family | SAMN04488524_2054 | Not Available | Negative | 2457874 - 2459418 | 56157.9 |
| hypothetical protein | SAMN04488524_2055 | Not Available | Negative | 2459540 - 2460595 | 40948.0 |
| membrane protein terc, possibly involved in tellurium resistance | SAMN04488524_2056 | Not Available | Negative | 2460605 - 2461396 | 29008.4 |
| hypothetical protein | SAMN04488524_2057 | Not Available | Negative | 2461478 - 2462626 | 41020.8 |
| hypothetical protein | SAMN04488524_2058 | Not Available | Negative | 2462623 - 2463150 | 20268.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488524_2059 | Not Available | Negative | 2463143 - 2463700 | 21352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

