Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter africanus |
| Strain | strain DSM 12126 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1609729 bp
Thymine Count
1628936 bp
Guanine Count
1235949 bp
Cytosine Count
1248253 bp
Genome Length
5722867 bp
Protein-coding Genes
4691 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | SAMN04488524_2030 | Not Available | Negative | 2436050 - 2436868 | 28310.5 |
| n-acetylglutamate kinase | SAMN04488524_2031 | Not Available | Negative | 2436872 - 2437663 | 28166.3 |
| ornithine carbamoyltransferase | SAMN04488524_2032 | Not Available | Negative | 2437668 - 2438630 | 36000.2 |
| acetylornithine aminotransferase | SAMN04488524_2033 | Not Available | Negative | 2438627 - 2439760 | 40946.1 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN04488524_2034 | Not Available | Negative | 2439851 - 2440822 | 35348.3 |
| argininosuccinate synthase | SAMN04488524_2035 | Not Available | Negative | 2440812 - 2442005 | 44306.8 |
| hypothetical protein | SAMN04488524_2036 | Not Available | Negative | 2442020 - 2442721 | 26553.4 |
| glycine/d-amino acid oxidase | SAMN04488524_2037 | Not Available | Negative | 2443063 - 2444265 | 45085.2 |
| peptidase family m28 | SAMN04488524_2038 | Not Available | Positive | 2444385 - 2445527 | 41823.3 |
| hypothetical protein | SAMN04488524_2039 | Not Available | Positive | 2445604 - 2445909 | 10860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

